Index

A

abs_path_or_model_dir_path() (in module pimlico.core.paths) absolute_path (pimlico.datatypes.files.File attribute) add_data_points() (pimlico.datatypes.features.IndexedTermFeatureListCorpusWriter method) (pimlico.datatypes.IndexedTermFeatureListCorpusWriter method) add_document() (pimlico.datatypes.tar.TarredCorpusWriter method) (pimlico.datatypes.TarredCorpusWriter method) add_documents() (pimlico.datatypes.dictionary.DictionaryWriter method) (pimlico.datatypes.DictionaryWriter method) add_execution_history_record() (pimlico.core.modules.base.BaseModuleInfo method) AddAnnotationField (class in pimlico.datatypes) (class in pimlico.datatypes.word_annotations) AlignedTarredCorpora (class in pimlico.datatypes) (class in pimlico.datatypes.tar)

all_dependencies() (pimlico.core.dependencies.base.SoftwareDependency method) all_inputs_ready() (pimlico.core.modules.base.BaseModuleInfo method) annotation_fields (pimlico.datatypes.word_annotations.WordAnnotationCorpus attribute) (pimlico.datatypes.WordAnnotationCorpus attribute) AnnotationParseError, [1] archive_iter() (pimlico.core.modules.map.filter.DocumentMapOutputTypeWrapper method) (pimlico.datatypes.AlignedTarredCorpora method) (pimlico.datatypes.TarredCorpus method) (pimlico.datatypes.tar.AlignedTarredCorpora method) (pimlico.datatypes.tar.TarredCorpus method) array (pimlico.datatypes.arrays.NumpyArray attribute) (pimlico.datatypes.NumpyArray attribute) (pimlico.datatypes.ScipySparseMatrix attribute) (pimlico.datatypes.arrays.ScipySparseMatrix attribute) available() (pimlico.core.dependencies.base.SoftwareDependency method)

B

BaseModuleExecutor (class in pimlico.core.modules.base) BaseModuleInfo (class in pimlico.core.modules.base)

browse_cmd_with_deps() (in module pimlico.cli.run)

C

CaevoCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.caevo) call_java() (in module pimlico.core.external.java) CandcOutputCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.candc) CandcOutputCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.candc) check_and_install() (in module pimlico.core.dependencies.base) check_cmd() (in module pimlico.cli.check) check_for_cycles() (in module pimlico.core.config) check_for_error() (pimlico.core.modules.map.InputQueueFeeder method) check_java() (in module pimlico.core.dependencies.java) check_java_dependency() (in module pimlico.core.dependencies.java) check_pipeline() (in module pimlico.core.config) check_ready_to_run() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.multistage.MultistageModuleInfo method) check_release() (in module pimlico.core.config) check_runtime_dependencies() (pimlico.datatypes.base.PimlicoDatatype method) (pimlico.datatypes.PimlicoDatatype method) check_supplied_type() (pimlico.datatypes.base.IterableCorpus class method) (pimlico.datatypes.IterableCorpus class method) check_type() (in module pimlico.core.modules.base) (pimlico.datatypes.DynamicInputDatatypeRequirement method) (pimlico.datatypes.PimlicoDatatype class method) (pimlico.datatypes.WordAnnotationCorpusWithRequiredFields method) (pimlico.datatypes.base.DynamicInputDatatypeRequirement method) (pimlico.datatypes.base.PimlicoDatatype class method) (pimlico.datatypes.word_annotations.WordAnnotationCorpusWithRequiredFields method) choose_from_list() (in module pimlico.core.modules.options) clear_output_queues() (pimlico.core.external.java.Py4JInterface method) cmdloop() (pimlico.cli.shell.base.DataShell method) comma_separated_list() (in module pimlico.core.modules.options)

comma_separated_strings() (in module pimlico.core.modules.options) commands (pimlico.cli.shell.base.ShellCommand attribute) compare_dotted_versions() (in module pimlico.core.dependencies.versions) CoNLLDependencyParseCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.dependency) CoNLLDependencyParseCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.dependency) CoNLLDependencyParseInputCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.dependency) CoNLLDependencyParseInputCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.dependency) ConstituencyParseTreeCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.parse) ConstituencyParseTreeCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.parse) copy_dir_with_progress() (in module pimlico.utils.filesystem) CorefCorpus (class in pimlico.datatypes.coref.corenlp) (class in pimlico.datatypes.coref.opennlp) CorefCorpusWriter (class in pimlico.datatypes.coref.corenlp) (class in pimlico.datatypes.coref.opennlp) CorefDocumentType (class in pimlico.datatypes.coref.corenlp) (class in pimlico.datatypes.coref.opennlp) CoreNLPCorefCorpus (in module pimlico.datatypes) (in module pimlico.datatypes.coref) CoreNLPCorefCorpusWriter (in module pimlico.datatypes) (in module pimlico.datatypes.coref) CorpusAlignmentError, [1] create_from_options() (pimlico.datatypes.base.PimlicoDatatype class method) (pimlico.datatypes.PimlicoDatatype class method) create_pool() (pimlico.core.modules.map.DocumentMapModuleExecutor method) (pimlico.core.modules.map.multiproc.MultiprocessingMapModuleExecutor method) (pimlico.core.modules.map.singleproc.SingleThreadMapModuleExecutor method) (pimlico.core.modules.map.threaded.ThreadingMapModuleExecutor method) create_queue() (pimlico.core.modules.map.DocumentProcessorPool static method) (pimlico.core.modules.map.multiproc.MultiprocessingMapPool static method) (pimlico.core.modules.map.threaded.ThreadingMapPool static method) custom_objects (pimlico.datatypes.keras.KerasModel attribute)

D

data (pimlico.datatypes.results.NumericResult attribute) data_path (pimlico.datatypes.plotting.PlotOutput attribute) data_point_type (pimlico.datatypes.base.IterableCorpus attribute) (pimlico.datatypes.CaevoCorpus attribute) (pimlico.datatypes.CandcOutputCorpus attribute) (pimlico.datatypes.CoNLLDependencyParseCorpus attribute) (pimlico.datatypes.CoNLLDependencyParseInputCorpus attribute) (pimlico.datatypes.ConstituencyParseTreeCorpus attribute) (pimlico.datatypes.IndexedTermFeatureListCorpus attribute) (pimlico.datatypes.IterableCorpus attribute) (pimlico.datatypes.JsonDocumentCorpus attribute) (pimlico.datatypes.KeyValueListCorpus attribute) (pimlico.datatypes.StanfordDependencyParseCorpus attribute) (pimlico.datatypes.TarredCorpus attribute) (pimlico.datatypes.TermFeatureListCorpus attribute) (pimlico.datatypes.TokenizedCorpus attribute) (pimlico.datatypes.WordAnnotationCorpus attribute) (pimlico.datatypes.XmlDocumentIterator attribute) (pimlico.datatypes.caevo.CaevoCorpus attribute) (pimlico.datatypes.coref.corenlp.CorefCorpus attribute) (pimlico.datatypes.coref.opennlp.CorefCorpus attribute) (pimlico.datatypes.features.IndexedTermFeatureListCorpus attribute) (pimlico.datatypes.features.KeyValueListCorpus attribute) (pimlico.datatypes.features.TermFeatureListCorpus attribute) (pimlico.datatypes.ints.IntegerListsDocumentCorpus attribute) (pimlico.datatypes.jsondoc.JsonDocumentCorpus attribute) (pimlico.datatypes.parse.CandcOutputCorpus attribute) (pimlico.datatypes.parse.CoNLLDependencyParseCorpus attribute) (pimlico.datatypes.parse.CoNLLDependencyParseInputCorpus attribute) (pimlico.datatypes.parse.ConstituencyParseTreeCorpus attribute) (pimlico.datatypes.parse.StanfordDependencyParseCorpus attribute) (pimlico.datatypes.parse.candc.CandcOutputCorpus attribute) (pimlico.datatypes.parse.dependency.CoNLLDependencyParseCorpus attribute) (pimlico.datatypes.parse.dependency.CoNLLDependencyParseInputCorpus attribute) (pimlico.datatypes.parse.dependency.StanfordDependencyParseCorpus attribute) (pimlico.datatypes.spans.SentenceSpansCorpus attribute) (pimlico.datatypes.table.IntegerTableDocumentCorpus attribute) (pimlico.datatypes.tar.TarredCorpus attribute) (pimlico.datatypes.tokenized.TokenizedCorpus attribute) (pimlico.datatypes.word_annotations.WordAnnotationCorpus attribute) (pimlico.datatypes.xml.XmlDocumentIterator attribute) data_ready() (pimlico.core.modules.map.filter.DocumentMapOutputTypeWrapper method) (pimlico.datatypes.Dictionary method) (pimlico.datatypes.NumpyArray method) (pimlico.datatypes.PimlicoDatatype method) (pimlico.datatypes.ScipySparseMatrix method) (pimlico.datatypes.TarredCorpus method) (pimlico.datatypes.WordAnnotationCorpus method) (pimlico.datatypes.XmlDocumentIterator method) (pimlico.datatypes.arrays.NumpyArray method) (pimlico.datatypes.arrays.ScipySparseMatrix method) (pimlico.datatypes.base.PimlicoDatatype method) (pimlico.datatypes.dictionary.Dictionary method) (pimlico.datatypes.files.File method) (pimlico.datatypes.tar.TarredCorpus method) (pimlico.datatypes.word2vec.Word2VecModel method) (pimlico.datatypes.word_annotations.WordAnnotationCorpus method) (pimlico.datatypes.xml.XmlDocumentIterator method) DataPointType (class in pimlico.datatypes.documents) DataShell (class in pimlico.cli.shell.base) DATATYPE (pimlico.cli.browser.formatter.DefaultFormatter attribute) (pimlico.cli.browser.formatter.DocumentBrowserFormatter attribute) (pimlico.cli.browser.formatter.InvalidDocumentFormatter attribute) datatype_doc_info (pimlico.datatypes.base.DynamicInputDatatypeRequirement attribute) (pimlico.datatypes.DynamicInputDatatypeRequirement attribute) datatype_full_class_name() (pimlico.datatypes.base.PimlicoDatatype class method) (pimlico.datatypes.PimlicoDatatype class method) datatype_name (pimlico.datatypes.base.DynamicOutputDatatype attribute) (pimlico.datatypes.CandcOutputCorpus attribute) (pimlico.datatypes.CoNLLDependencyParseCorpus attribute) (pimlico.datatypes.CoNLLDependencyParseInputCorpus attribute) (pimlico.datatypes.ConstituencyParseTreeCorpus attribute) (pimlico.datatypes.Dictionary attribute) (pimlico.datatypes.DynamicOutputDatatype attribute) (pimlico.datatypes.IterableCorpus attribute) (pimlico.datatypes.JsonDocumentCorpus attribute) (pimlico.datatypes.KeyValueListCorpus attribute) (pimlico.datatypes.PimlicoDatatype attribute) (pimlico.datatypes.StanfordDependencyParseCorpus attribute) (pimlico.datatypes.TarredCorpus attribute) (pimlico.datatypes.TermFeatureListCorpus attribute) (pimlico.datatypes.TokenizedCorpus attribute) (pimlico.datatypes.WordAnnotationCorpus attribute) (pimlico.datatypes.base.IterableCorpus attribute) (pimlico.datatypes.base.PimlicoDatatype attribute) (pimlico.datatypes.coref.corenlp.CorefCorpus attribute) (pimlico.datatypes.coref.opennlp.CorefCorpus attribute) (pimlico.datatypes.dictionary.Dictionary attribute) (pimlico.datatypes.features.KeyValueListCorpus attribute) (pimlico.datatypes.features.TermFeatureListCorpus attribute) (pimlico.datatypes.files.File attribute) (pimlico.datatypes.ints.IntegerListsDocumentCorpus attribute) (pimlico.datatypes.jsondoc.JsonDocumentCorpus attribute) (pimlico.datatypes.parse.CandcOutputCorpus attribute) (pimlico.datatypes.parse.CoNLLDependencyParseCorpus attribute) (pimlico.datatypes.parse.CoNLLDependencyParseInputCorpus attribute) (pimlico.datatypes.parse.ConstituencyParseTreeCorpus attribute) (pimlico.datatypes.parse.StanfordDependencyParseCorpus attribute) (pimlico.datatypes.parse.candc.CandcOutputCorpus attribute) (pimlico.datatypes.parse.dependency.CoNLLDependencyParseCorpus attribute) (pimlico.datatypes.parse.dependency.CoNLLDependencyParseInputCorpus attribute) (pimlico.datatypes.parse.dependency.StanfordDependencyParseCorpus attribute) (pimlico.datatypes.table.IntegerTableDocumentCorpus attribute) (pimlico.datatypes.tar.TarredCorpus attribute) (pimlico.datatypes.tokenized.TokenizedCorpus attribute) (pimlico.datatypes.word_annotations.WordAnnotationCorpus attribute) DatatypeLoadError, [1] DatatypeWriteError, [1] default() (pimlico.cli.shell.base.DataShell method) DefaultFormatter (class in pimlico.cli.browser.formatter) dependencies (pimlico.core.modules.base.BaseModuleInfo attribute) dependencies() (pimlico.core.dependencies.base.SoftwareDependency method) (pimlico.core.dependencies.java.Py4JSoftwareDependency method) DependencyCheckerError DependencyError

deps_cmd() (in module pimlico.cli.check) Dictionary (class in pimlico.datatypes) (class in pimlico.datatypes.dictionary) DictionaryWriter (class in pimlico.datatypes) (class in pimlico.datatypes.dictionary) dirsize() (in module pimlico.utils.filesystem) do_EOF() (pimlico.cli.shell.base.DataShell method) doc_iter() (pimlico.datatypes.tar.TarredCorpus method) (pimlico.datatypes.TarredCorpus method) document_preprocessors (pimlico.datatypes.tar.TarredCorpus attribute) (pimlico.datatypes.TarredCorpus attribute) document_to_raw_data() (pimlico.datatypes.CandcOutputCorpusWriter method) (pimlico.datatypes.CoNLLDependencyParseCorpusWriter method) (pimlico.datatypes.CoNLLDependencyParseInputCorpusWriter method) (pimlico.datatypes.ConstituencyParseTreeCorpusWriter method) (pimlico.datatypes.JsonDocumentCorpusWriter method) (pimlico.datatypes.KeyValueListCorpusWriter method) (pimlico.datatypes.SimpleWordAnnotationCorpusWriter method) (pimlico.datatypes.StanfordDependencyParseCorpusWriter method) (pimlico.datatypes.TarredCorpusWriter method) (pimlico.datatypes.TermFeatureListCorpusWriter method) (pimlico.datatypes.TokenizedCorpusWriter method) (pimlico.datatypes.coref.corenlp.CorefCorpusWriter method) (pimlico.datatypes.coref.opennlp.CorefCorpusWriter method) (pimlico.datatypes.features.KeyValueListCorpusWriter method) (pimlico.datatypes.features.TermFeatureListCorpusWriter method) (pimlico.datatypes.ints.IntegerListsDocumentCorpusWriter method) (pimlico.datatypes.jsondoc.JsonDocumentCorpusWriter method) (pimlico.datatypes.parse.CandcOutputCorpusWriter method) (pimlico.datatypes.parse.CoNLLDependencyParseCorpusWriter method) (pimlico.datatypes.parse.CoNLLDependencyParseInputCorpusWriter method) (pimlico.datatypes.parse.ConstituencyParseTreeCorpusWriter method) (pimlico.datatypes.parse.StanfordDependencyParseCorpusWriter method) (pimlico.datatypes.parse.candc.CandcOutputCorpusWriter method) (pimlico.datatypes.parse.dependency.CoNLLDependencyParseCorpusWriter method) (pimlico.datatypes.parse.dependency.CoNLLDependencyParseInputCorpusWriter method) (pimlico.datatypes.parse.dependency.StanfordDependencyParseCorpusWriter method) (pimlico.datatypes.spans.SentenceSpansCorpusWriter method) (pimlico.datatypes.table.IntegerTableDocumentCorpusWriter method) (pimlico.datatypes.tar.TarredCorpusWriter method) (pimlico.datatypes.tokenized.TokenizedCorpusWriter method) (pimlico.datatypes.word_annotations.SimpleWordAnnotationCorpusWriter method) DocumentBrowserFormatter (class in pimlico.cli.browser.formatter) DocumentMapModuleExecutor (class in pimlico.core.modules.map) DocumentMapModuleInfo (class in pimlico.core.modules.map) DocumentMapOutputTypeWrapper (class in pimlico.core.modules.map.filter) DocumentMapProcessMixin (class in pimlico.core.modules.map) DocumentProcessorPool (class in pimlico.core.modules.map) download_file() (in module pimlico.utils.web) DynamicInputDatatypeRequirement (class in pimlico.datatypes) (class in pimlico.datatypes.base) DynamicOutputDatatype (class in pimlico.datatypes) (class in pimlico.datatypes.base)

E

empty() (pimlico.core.config.PipelineConfig static method) emptyline() (pimlico.cli.shell.base.DataShell method) emulated_datatype (pimlico.datatypes.base.PimlicoDatatype attribute) (pimlico.datatypes.PimlicoDatatype attribute) encode() (pimlico.utils.communicate.StreamCommunicationPacket method) Entity (class in pimlico.datatypes.coref.corenlp) (class in pimlico.datatypes.coref.opennlp) execute() (pimlico.cli.shell.base.ShellCommand method) (pimlico.core.modules.base.BaseModuleExecutor method) (pimlico.core.modules.map.DocumentMapModuleExecutor method) execute_module() (in module pimlico.core.modules.execute)

execution_history (pimlico.core.modules.base.BaseModuleInfo attribute) execution_history_path (pimlico.core.modules.base.BaseModuleInfo attribute) extract_archive() (in module pimlico.utils.filesystem) extract_file() (pimlico.datatypes.tar.TarredCorpus method) (pimlico.datatypes.TarredCorpus method) extract_from_archive() (in module pimlico.utils.filesystem) extract_input_options() (pimlico.core.modules.base.BaseModuleInfo class method)

F

feature_dictionary (pimlico.datatypes.features.IndexedTermFeatureListCorpus attribute) (pimlico.datatypes.IndexedTermFeatureListCorpus attribute) File (class in pimlico.datatypes.files) filter() (pimlico.datatypes.dictionary.DictionaryWriter method) (pimlico.datatypes.DictionaryWriter method) filter_document() (pimlico.cli.browser.formatter.DocumentBrowserFormatter method) (pimlico.cli.browser.formatter.InvalidDocumentFormatter method) find_all_data_paths() (pimlico.core.config.PipelineConfig method) find_data_path() (pimlico.core.config.PipelineConfig method)

format_document() (pimlico.cli.browser.formatter.DefaultFormatter method) (pimlico.cli.browser.formatter.DocumentBrowserFormatter method) (pimlico.cli.browser.formatter.InvalidDocumentFormatter method) format_execution_dependency_tree() (in module pimlico.core.modules.execute) format_file_size() (in module pimlico.utils.filesystem) format_option_type() (in module pimlico.core.modules.options) from_java_object() (pimlico.datatypes.coref.opennlp.Entity static method) (pimlico.datatypes.coref.opennlp.Mention static method) from_json() (pimlico.datatypes.coref.corenlp.Mention static method) (pimlico.datatypes.coref.opennlp.Entity static method) (pimlico.datatypes.coref.opennlp.Mention static method)

G

gateway_client_to_running_server() (in module pimlico.core.external.java) generate_contents_page() (in module pimlico.utils.docs.modulegen) generate_docs_for_pimlico_mod() (in module pimlico.utils.docs.modulegen) generate_docs_for_pymod() (in module pimlico.utils.docs.modulegen) get() (pimlico.utils.pipes.OutputQueue method) get_absolute_output_dir() (pimlico.core.modules.base.BaseModuleInfo method) get_all_executed_modules() (pimlico.core.modules.base.BaseModuleInfo method) get_available() (pimlico.utils.pipes.OutputQueue method) get_base_datatype_class() (pimlico.datatypes.AddAnnotationField class method) (pimlico.datatypes.DynamicOutputDatatype method) (pimlico.datatypes.base.DynamicOutputDatatype method) (pimlico.datatypes.word_annotations.AddAnnotationField class method) get_classpath() (in module pimlico.core.dependencies.java) get_classpath_components() (pimlico.core.dependencies.java.JavaDependency method) get_console_logger() (in module pimlico.utils.logging) get_custom_objects() (pimlico.datatypes.keras.KerasModel method) get_data() (pimlico.datatypes.Dictionary method) (pimlico.datatypes.dictionary.Dictionary method) get_datatype() (pimlico.datatypes.AddAnnotationField method) (pimlico.datatypes.DynamicOutputDatatype method) (pimlico.datatypes.base.DynamicOutputDatatype method) (pimlico.datatypes.word_annotations.AddAnnotationField method) get_dependencies() (in module pimlico.core.config) get_dependent_modules() (pimlico.core.config.PipelineConfig method) get_detailed_status() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.map.DocumentMapModuleInfo method) (pimlico.core.modules.multistage.MultistageModuleInfo method) (pimlico.datatypes.IterableCorpus method) (pimlico.datatypes.PimlicoDatatype method) (pimlico.datatypes.base.IterableCorpus method) (pimlico.datatypes.base.PimlicoDatatype method) get_execution_dependency_tree() (pimlico.core.modules.base.BaseModuleInfo method) get_extra_outputs_from_options() (pimlico.core.modules.base.BaseModuleInfo static method) get_head_word() (pimlico.datatypes.coref.opennlp.Entity method) get_input() (pimlico.core.modules.base.BaseModuleInfo method) get_input_datatype() (pimlico.core.modules.base.BaseModuleInfo method) get_input_module_connection() (pimlico.core.modules.base.BaseModuleInfo method)

get_input_software_dependencies() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.multistage.MultistageModuleInfo method) get_installed_version() (pimlico.core.dependencies.base.SoftwareDependency method) (pimlico.core.dependencies.python.PythonPackageDependency method) (pimlico.core.dependencies.python.PythonPackageOnPip method) get_key_info_table() (pimlico.core.modules.base.BaseModuleInfo class method) (pimlico.core.modules.multistage.MultistageModuleInfo class method) get_log_file() (in module pimlico.core.logs) get_metadata() (pimlico.core.modules.base.BaseModuleInfo method) get_module_classpath() (in module pimlico.core.dependencies.java) get_module_output_dir() (pimlico.core.modules.base.BaseModuleInfo method) get_module_schedule() (pimlico.core.config.PipelineConfig method) get_next_output_document() (pimlico.core.modules.map.InputQueueFeeder method) get_next_stage() (pimlico.core.modules.multistage.MultistageModuleInfo method) get_nowait() (pimlico.utils.pipes.OutputQueue method) get_output() (pimlico.core.modules.base.BaseModuleInfo method) get_output_datatype() (pimlico.core.modules.base.BaseModuleInfo method) get_output_dir() (pimlico.core.modules.base.BaseModuleInfo method) get_progress_bar() (in module pimlico.utils.progress) get_redirect_func() (in module pimlico.core.external.java) get_required_paths() (pimlico.datatypes.base.PimlicoDatatype method) (pimlico.datatypes.PimlicoDatatype method) get_software_dependencies() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.multistage.MultistageModuleInfo method) (pimlico.datatypes.NumpyArray method) (pimlico.datatypes.PimlicoDatatype method) (pimlico.datatypes.ScipySparseMatrix method) (pimlico.datatypes.XmlDocumentIterator method) (pimlico.datatypes.arrays.NumpyArray method) (pimlico.datatypes.arrays.ScipySparseMatrix method) (pimlico.datatypes.base.PimlicoDatatype method) (pimlico.datatypes.keras.KerasModel method) (pimlico.datatypes.word2vec.Word2VecModel method) (pimlico.datatypes.xml.XmlDocumentIterator method) get_struct() (in module pimlico.datatypes.table) get_unused_local_port() (in module pimlico.utils.network) get_unused_local_ports() (in module pimlico.utils.network) get_writer() (pimlico.core.modules.map.DocumentMapModuleInfo method) get_writers() (pimlico.core.modules.map.DocumentMapModuleInfo method)

H

help_text (pimlico.cli.shell.base.ShellCommand attribute)

I

import_member() (in module pimlico.utils.core) import_package() (pimlico.core.dependencies.python.PythonPackageDependency method) increment() (pimlico.utils.progress.SafeProgressBar method) IndexedTermFeatureListCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.features) IndexedTermFeatureListCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.features) infinite_cycle() (in module pimlico.utils.core) input_datatype_list() (in module pimlico.utils.docs.modulegen) input_datatype_text() (in module pimlico.utils.docs.modulegen) input_module_factory() (in module pimlico.core.modules.inputs) input_module_options (pimlico.datatypes.base.PimlicoDatatype attribute) (pimlico.datatypes.PimlicoDatatype attribute) (pimlico.datatypes.XmlDocumentIterator attribute) (pimlico.datatypes.documents.DataPointType attribute) (pimlico.datatypes.xml.XmlDocumentIterator attribute) input_names (pimlico.core.modules.base.BaseModuleInfo attribute) input_ready() (pimlico.core.modules.base.BaseModuleInfo method) InputModuleInfo (class in pimlico.core.modules.inputs) InputQueueFeeder (class in pimlico.core.modules.map) insert_module() (pimlico.core.config.PipelineConfig method) install() (in module pimlico.core.dependencies.base) (pimlico.core.dependencies.base.SoftwareDependency method) (pimlico.core.dependencies.java.JavaJarsDependency method) (pimlico.core.dependencies.java.Py4JSoftwareDependency method) (pimlico.core.dependencies.python.PythonPackageOnPip method) install_cmd() (in module pimlico.cli.check) install_core_dependencies() (in module pimlico) install_dependencies() (in module pimlico.core.dependencies.base) installable() (pimlico.core.dependencies.base.SoftwareDependency method) (pimlico.core.dependencies.base.SystemCommandDependency method) (pimlico.core.dependencies.java.JavaDependency method) (pimlico.core.dependencies.java.Py4JSoftwareDependency method) (pimlico.core.dependencies.python.PythonPackageOnPip method) (pimlico.core.dependencies.python.PythonPackageSystemwideInstall method) installation_instructions() (pimlico.core.dependencies.base.SoftwareDependency method) (pimlico.core.dependencies.python.PythonPackageSystemwideInstall method) InstallationError

instantiate_additional_datatype() (pimlico.datatypes.base.PimlicoDatatype method) (pimlico.datatypes.PimlicoDatatype method) instantiate_output_datatype() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.inputs.InputModuleInfo method) int_size (pimlico.datatypes.ints.IntegerListsDocumentType attribute) IntegerListsDocumentCorpus (class in pimlico.datatypes.ints) IntegerListsDocumentCorpusWriter (class in pimlico.datatypes.ints) IntegerListsDocumentType (class in pimlico.datatypes.ints) IntegerTableDocumentCorpus (class in pimlico.datatypes.table) IntegerTableDocumentCorpusWriter (class in pimlico.datatypes.table) IntegerTableDocumentType (class in pimlico.datatypes.table) InternalModuleConnection (class in pimlico.core.modules.multistage) invalid_doc_on_error() (in module pimlico.core.modules.map) invalid_docs_on_error() (in module pimlico.core.modules.map) invalid_document_or_text() (pimlico.datatypes.base.InvalidDocument static method) (pimlico.datatypes.InvalidDocument static method) InvalidDocument (class in pimlico.datatypes) (class in pimlico.datatypes.base) InvalidDocumentFormatter (class in pimlico.cli.browser.formatter) is_filter() (pimlico.core.modules.base.BaseModuleInfo class method) is_identifier() (in module pimlico.utils.core) is_input() (pimlico.core.modules.base.BaseModuleInfo class method) is_locked() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.multistage.MultistageModuleInfo method) is_multiple_input() (pimlico.core.modules.base.BaseModuleInfo method) IterableCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.base) IterableCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.base)

J

jars (pimlico.core.dependencies.java.Py4JSoftwareDependency attribute) JavaDependency (class in pimlico.core.dependencies.java) JavaJarsDependency (class in pimlico.core.dependencies.java)

JavaProcessError JsonDocumentCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.jsondoc) JsonDocumentCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.jsondoc)

K

KerasModel (class in pimlico.datatypes.keras) KerasModelWriter (class in pimlico.datatypes.keras)

KeyValueListCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.features) KeyValueListCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.features)

L

label (pimlico.datatypes.results.NumericResult attribute) launch_gateway() (in module pimlico.core.external.java) launch_shell() (in module pimlico.cli.shell.runner) length (pimlico.utils.communicate.StreamCommunicationPacket attribute) limited_shuffle() (in module pimlico.utils.probability) list_archive_iter() (pimlico.datatypes.tar.TarredCorpus method) (pimlico.datatypes.TarredCorpus method) list_variants() (in module pimlico.cli.run) load() (pimlico.core.config.PipelineConfig static method) (pimlico.datatypes.InvalidDocument static method) (pimlico.datatypes.base.InvalidDocument static method) load_datatype() (in module pimlico.datatypes) (in module pimlico.datatypes.base)

load_executor() (pimlico.core.modules.base.BaseModuleInfo method) load_formatter() (in module pimlico.cli.browser.formatter) load_local_config() (pimlico.core.config.PipelineConfig static method) load_model() (pimlico.datatypes.keras.KerasModel method) (pimlico.datatypes.word2vec.Word2VecModel method) load_module_executor() (in module pimlico.core.modules.base) load_module_info() (in module pimlico.core.modules.base) (pimlico.core.config.PipelineConfig method) lock() (pimlico.core.modules.base.BaseModuleInfo method) lock_path (pimlico.core.modules.base.BaseModuleInfo attribute)

M

main_module (pimlico.core.modules.base.BaseModuleInfo attribute) make_py4j_errors_safe() (in module pimlico.core.external.java) make_table() (in module pimlico.utils.docs.rest) Mention (class in pimlico.datatypes.coref.corenlp) (class in pimlico.datatypes.coref.opennlp) metadata (pimlico.datatypes.base.PimlicoDatatype attribute) (pimlico.datatypes.PimlicoDatatype attribute) metadata_filename (pimlico.core.modules.base.BaseModuleInfo attribute) missing_data() (pimlico.core.modules.base.BaseModuleInfo method) model (pimlico.datatypes.word2vec.Word2VecModel attribute) module_dependencies (pimlico.core.config.PipelineConfig attribute) module_executable (pimlico.core.modules.base.BaseModuleInfo attribute) (pimlico.core.modules.inputs.InputModuleInfo attribute) (pimlico.core.modules.multistage.MultistageModuleInfo attribute) module_executor_override (pimlico.core.modules.base.BaseModuleInfo attribute) module_inputs (pimlico.core.modules.base.BaseModuleInfo attribute) module_optional_outputs (pimlico.core.modules.base.BaseModuleInfo attribute) module_options (pimlico.core.modules.base.BaseModuleInfo attribute) module_outputs (pimlico.core.modules.base.BaseModuleInfo attribute) (pimlico.core.modules.map.DocumentMapModuleInfo attribute) module_package_name() (pimlico.core.modules.base.BaseModuleInfo class method) module_readable_name (pimlico.core.modules.base.BaseModuleInfo attribute) module_status() (in module pimlico.cli.status) module_status_color() (in module pimlico.cli.status) module_type_name (pimlico.core.modules.base.BaseModuleInfo attribute) (pimlico.core.modules.inputs.InputModuleInfo attribute) ModuleAlreadyCompletedError

ModuleConnection (class in pimlico.core.modules.multistage) ModuleExecutionError ModuleExecutorLoadError ModuleInfoLoadError ModuleInputConnection (class in pimlico.core.modules.multistage) ModuleNotReadyError ModuleOptionParseError ModuleOutputConnection (class in pimlico.core.modules.multistage) modules (pimlico.core.config.PipelineConfig attribute) ModuleStage (class in pimlico.core.modules.multistage) ModuleTypeError multiline_tablate() (in module pimlico.utils.format) multiply_alternatives() (in module pimlico.core.config) multiprocessing_executor_factory() (in module pimlico.core.modules.map.multiproc) MultiprocessingMapModuleExecutor (class in pimlico.core.modules.map.multiproc) MultiprocessingMapPool (class in pimlico.core.modules.map.multiproc) MultiprocessingMapProcess (class in pimlico.core.modules.map.multiproc) multistage_module() (in module pimlico.core.modules.multistage) MultistageModuleInfo (class in pimlico.core.modules.multistage) MultistageModulePreparationError multiwith() (in module pimlico.utils.core)

N

NamedFile() (in module pimlico.datatypes.files) new_client() (pimlico.core.external.java.Py4JInterface method) new_filename() (in module pimlico.utils.filesystem) no_retry_gateway() (in module pimlico.core.external.java) non_filter_datatype (pimlico.core.modules.map.filter.DocumentMapOutputTypeWrapper attribute) NonPTBTagError

normalize_cell() (in module pimlico.utils.docs.rest) notify_no_more_inputs() (pimlico.core.modules.map.DocumentMapProcessMixin method) (pimlico.core.modules.map.DocumentProcessorPool method) (pimlico.core.modules.map.multiproc.MultiprocessingMapPool method) (pimlico.core.modules.map.multiproc.MultiprocessingMapProcess method) (pimlico.core.modules.map.threaded.ThreadingMapThread method) NumericResult (class in pimlico.datatypes.results) NumericResultWriter (class in pimlico.datatypes.results) NumpyArray (class in pimlico.datatypes) (class in pimlico.datatypes.arrays) NumpyArrayWriter (class in pimlico.datatypes) (class in pimlico.datatypes.arrays)

O

OpenNLPCorefCorpus (in module pimlico.datatypes) (in module pimlico.datatypes.coref) OpenNLPCorefCorpusWriter (in module pimlico.datatypes) (in module pimlico.datatypes.coref) opt_type_help() (in module pimlico.core.modules.options) output_datatype_text() (in module pimlico.utils.docs.modulegen) output_name (pimlico.core.modules.map.filter.DocumentMapOutputTypeWrapper attribute)

output_names (pimlico.core.modules.base.BaseModuleInfo attribute) output_p4j_error_info() (in module pimlico.core.external.java) OutputConsumer (class in pimlico.core.external.java) OutputQueue (class in pimlico.utils.pipes)

P

path_relative_to_config() (pimlico.core.config.PipelineConfig method) pdf_path (pimlico.datatypes.plotting.PlotOutput attribute) pimlico (module) pimlico.cli (module) pimlico.cli.browser (module) pimlico.cli.browser.formatter (module) pimlico.cli.check (module) pimlico.cli.run (module) pimlico.cli.shell (module) pimlico.cli.shell.base (module) pimlico.cli.shell.commands (module) pimlico.cli.shell.runner (module) pimlico.cli.status (module) pimlico.core (module) pimlico.core.config (module) pimlico.core.dependencies (module) pimlico.core.dependencies.base (module) pimlico.core.dependencies.core (module) pimlico.core.dependencies.java (module) pimlico.core.dependencies.python (module) pimlico.core.dependencies.versions (module) pimlico.core.external (module) pimlico.core.external.java (module) pimlico.core.logs (module) pimlico.core.modules (module) pimlico.core.modules.base (module) pimlico.core.modules.execute (module) pimlico.core.modules.inputs (module) pimlico.core.modules.map (module) pimlico.core.modules.map.filter (module) pimlico.core.modules.map.multiproc (module) pimlico.core.modules.map.singleproc (module) pimlico.core.modules.map.threaded (module) pimlico.core.modules.multistage (module) pimlico.core.modules.options (module) pimlico.core.paths (module) pimlico.datatypes (module) pimlico.datatypes.arrays (module) pimlico.datatypes.base (module) pimlico.datatypes.caevo (module) pimlico.datatypes.coref (module) pimlico.datatypes.coref.corenlp (module) pimlico.datatypes.coref.opennlp (module) pimlico.datatypes.dictionary (module) pimlico.datatypes.documents (module) pimlico.datatypes.features (module) pimlico.datatypes.files (module) pimlico.datatypes.ints (module) pimlico.datatypes.jsondoc (module) pimlico.datatypes.keras (module) pimlico.datatypes.parse (module) pimlico.datatypes.parse.candc (module) pimlico.datatypes.parse.dependency (module) pimlico.datatypes.plotting (module) pimlico.datatypes.results (module) pimlico.datatypes.spans (module) pimlico.datatypes.table (module) pimlico.datatypes.tar (module) pimlico.datatypes.tokenized (module) pimlico.datatypes.word2vec (module) pimlico.datatypes.word_annotations (module) pimlico.datatypes.xml (module) pimlico.modules (module) pimlico.modules.caevo (module) pimlico.modules.candc (module) pimlico.modules.corenlp (module) pimlico.modules.corpora (module) pimlico.modules.corpora.format (module) pimlico.modules.corpora.list_filter (module) pimlico.modules.corpora.split (module) pimlico.modules.corpora.subset (module) pimlico.modules.corpora.tar (module) pimlico.modules.corpora.tar_filter (module) pimlico.modules.corpora.vocab_builder (module) pimlico.modules.corpora.vocab_mapper (module) pimlico.modules.embeddings (module) pimlico.modules.embeddings.dependencies (module) pimlico.modules.embeddings.word2vec (module)

pimlico.modules.features (module) pimlico.modules.features.term_feature_compiler (module) pimlico.modules.features.term_feature_matrix_builder (module) pimlico.modules.features.vocab_builder (module) pimlico.modules.features.vocab_mapper (module) pimlico.modules.malt (module) pimlico.modules.malt.conll_parser_input (module) pimlico.modules.malt.parse (module) pimlico.modules.opennlp (module) pimlico.modules.opennlp.coreference (module) pimlico.modules.opennlp.coreference_pipeline (module) pimlico.modules.opennlp.ner (module) pimlico.modules.opennlp.parse (module) pimlico.modules.opennlp.pos (module) pimlico.modules.opennlp.tokenize (module) pimlico.modules.regex (module) pimlico.modules.regex.annotated_text (module) pimlico.modules.sklearn (module) pimlico.modules.sklearn.matrix_factorization (module) pimlico.modules.utility (module) pimlico.modules.utility.copy_file (module) pimlico.modules.visualization (module) pimlico.modules.visualization.bar_chart (module) pimlico.utils (module) pimlico.utils.communicate (module) pimlico.utils.core (module) pimlico.utils.docs (module) pimlico.utils.docs.modulegen (module) pimlico.utils.docs.rest (module) pimlico.utils.filesystem (module) pimlico.utils.format (module) pimlico.utils.linguistic (module) pimlico.utils.logging (module) pimlico.utils.network (module) pimlico.utils.pipes (module) pimlico.utils.pos (module) pimlico.utils.probability (module) pimlico.utils.progress (module) pimlico.utils.strings (module) pimlico.utils.timeout (module) pimlico.utils.web (module) PimlicoDatatype (class in pimlico.datatypes) (class in pimlico.datatypes.base) PimlicoDatatypeWriter (class in pimlico.datatypes) (class in pimlico.datatypes.base) PimlicoJavaLibrary (class in pimlico.core.dependencies.java) PipelineCheckError PipelineConfig (class in pimlico.core.config) PipelineConfigParseError PipelineStructureError plot() (pimlico.datatypes.plotting.PlotOutput method) PlotOutput (class in pimlico.datatypes.plotting) PlotOutputWriter (class in pimlico.datatypes.plotting) POOL_TYPE (pimlico.core.modules.map.multiproc.MultiprocessingMapModuleExecutor attribute) (pimlico.core.modules.map.threaded.ThreadingMapModuleExecutor attribute) pos_tag_to_ptb() (in module pimlico.utils.pos) pos_tags_to_ptb() (in module pimlico.utils.pos) postloop() (pimlico.cli.shell.base.DataShell method) postprocess() (pimlico.core.modules.map.DocumentMapModuleExecutor method) (pimlico.core.modules.map.multiproc.MultiprocessingMapModuleExecutor method) (pimlico.core.modules.map.threaded.ThreadingMapModuleExecutor method) preloop() (pimlico.cli.shell.base.DataShell method) prepare_data() (pimlico.datatypes.base.PimlicoDatatype method) (pimlico.datatypes.PimlicoDatatype method) (pimlico.datatypes.XmlDocumentIterator method) (pimlico.datatypes.xml.XmlDocumentIterator method) preprocess() (pimlico.core.modules.map.DocumentMapModuleExecutor method) preprocess_config_file() (in module pimlico.core.config) print_dependency_leaf_problems() (in module pimlico.core.config) print_execution_error() (in module pimlico.cli.run) print_missing_dependencies() (in module pimlico.core.config) problems() (pimlico.core.dependencies.base.SoftwareDependency method) (pimlico.core.dependencies.base.SystemCommandDependency method) (pimlico.core.dependencies.java.JavaDependency method) (pimlico.core.dependencies.python.PythonPackageDependency method) process_config() (pimlico.core.modules.base.BaseModuleInfo class method) process_document() (pimlico.core.modules.map.DocumentMapProcessMixin method) (pimlico.datatypes.TarredCorpus method) (pimlico.datatypes.TreeStringsDocumentType method) (pimlico.datatypes.WordAnnotationsDocumentType method) (pimlico.datatypes.coref.corenlp.CorefDocumentType method) (pimlico.datatypes.coref.opennlp.CorefDocumentType method) (pimlico.datatypes.documents.RawDocumentType method) (pimlico.datatypes.ints.IntegerListsDocumentType method) (pimlico.datatypes.parse.TreeStringsDocumentType method) (pimlico.datatypes.spans.SentenceSpansDocumentType method) (pimlico.datatypes.table.IntegerTableDocumentType method) (pimlico.datatypes.tar.TarredCorpus method) (pimlico.datatypes.word_annotations.WordAnnotationsDocumentType method) process_documents() (pimlico.core.modules.map.DocumentMapProcessMixin method) process_module_options() (in module pimlico.core.modules.options) (pimlico.core.modules.base.BaseModuleInfo class method) PROCESS_TYPE (pimlico.core.modules.map.multiproc.MultiprocessingMapPool attribute) ProcessOutput (class in pimlico.core.modules.map) ProgressBarIter (class in pimlico.utils.progress) prompt (pimlico.cli.shell.base.DataShell attribute) Py4JInterface (class in pimlico.core.external.java) Py4JSafeJavaError Py4JSoftwareDependency (class in pimlico.core.dependencies.java) PythonPackageDependency (class in pimlico.core.dependencies.python) PythonPackageOnPip (class in pimlico.core.dependencies.python) PythonPackageSystemwideInstall (class in pimlico.core.dependencies.python)

Q

qget() (in module pimlico.utils.pipes)

R

RAW_INPUT (pimlico.cli.browser.formatter.DocumentBrowserFormatter attribute) RawDocumentType (class in pimlico.datatypes.documents) RawTextDocumentType (class in pimlico.datatypes.documents) read() (pimlico.utils.communicate.StreamCommunicationPacket static method) read_annotation_fields() (pimlico.datatypes.word_annotations.WordAnnotationCorpus method) (pimlico.datatypes.WordAnnotationCorpus method) read_rows() (pimlico.datatypes.ints.IntegerListsDocumentType method) (pimlico.datatypes.table.IntegerTableDocumentType method) recursive_deps() (in module pimlico.core.dependencies.base) remove_duplicates() (in module pimlico.utils.core) remove_temporary_redirects() (pimlico.core.external.java.OutputConsumer method) require_tasks() (pimlico.datatypes.base.PimlicoDatatypeWriter method) (pimlico.datatypes.PimlicoDatatypeWriter method)

requires_data_preparation (pimlico.datatypes.base.PimlicoDatatype attribute) (pimlico.datatypes.PimlicoDatatype attribute) (pimlico.datatypes.XmlDocumentIterator attribute) (pimlico.datatypes.xml.XmlDocumentIterator attribute) reset_all_modules() (pimlico.core.config.PipelineConfig method) reset_execution() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.multistage.MultistageModuleInfo method) reset_module() (in module pimlico.cli.run) result (pimlico.datatypes.results.NumericResult attribute) retrieve_processing_status() (pimlico.core.modules.map.DocumentMapModuleExecutor method) retry_open() (in module pimlico.utils.filesystem) row_size (pimlico.datatypes.table.IntegerTableDocumentType attribute) run() (pimlico.core.external.java.OutputConsumer method) (pimlico.core.modules.map.InputQueueFeeder method) (pimlico.core.modules.map.multiproc.MultiprocessingMapProcess method) (pimlico.core.modules.map.threaded.ThreadingMapThread method) run_cmd() (in module pimlico.cli.run)

S

SafeProgressBar (class in pimlico.utils.progress) ScipySparseMatrix (class in pimlico.datatypes) (class in pimlico.datatypes.arrays) ScipySparseMatrixWriter (class in pimlico.datatypes) (class in pimlico.datatypes.arrays) script_path (pimlico.datatypes.plotting.PlotOutput attribute) sentence_boundary_re (pimlico.datatypes.word_annotations.WordAnnotationsDocumentType attribute) (pimlico.datatypes.WordAnnotationsDocumentType attribute) SentenceSpansCorpus (class in pimlico.datatypes.spans) SentenceSpansCorpusWriter (class in pimlico.datatypes.spans) SentenceSpansDocumentType (class in pimlico.datatypes.spans) sequential_document_sample() (in module pimlico.utils.probability) sequential_sample() (in module pimlico.utils.probability) set_array() (pimlico.datatypes.arrays.NumpyArrayWriter method) (pimlico.datatypes.NumpyArrayWriter method) set_matrix() (pimlico.datatypes.arrays.ScipySparseMatrixWriter method) (pimlico.datatypes.ScipySparseMatrixWriter method) set_metadata_value() (pimlico.core.modules.base.BaseModuleInfo method) set_metadata_values() (pimlico.core.modules.base.BaseModuleInfo method) set_up() (pimlico.core.modules.map.DocumentMapProcessMixin method) shell_cmd() (in module pimlico.cli.shell.runner) shell_commands (pimlico.datatypes.base.PimlicoDatatype attribute) (pimlico.datatypes.PimlicoDatatype attribute) (pimlico.datatypes.word2vec.Word2VecModel attribute) ShellCommand (class in pimlico.cli.shell.base) ShellError short_to_long() (in module pimlico.cli.run) shutdown() (pimlico.core.modules.map.multiproc.MultiprocessingMapPool method) (pimlico.core.modules.map.threaded.ThreadingMapPool method) SimpleWordAnnotationCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.word_annotations) single_process_executor_factory() (in module pimlico.core.modules.map.singleproc) SingleThreadMapModuleExecutor (class in pimlico.core.modules.map.singleproc) skip_invalid() (in module pimlico.core.modules.map)

skip_invalids() (in module pimlico.core.modules.map) slice_progress() (in module pimlico.utils.progress) SoftwareDependency (class in pimlico.core.dependencies.base) SoftwareVersion (class in pimlico.core.dependencies.versions) split_seq() (in module pimlico.utils.core) split_seq_after() (in module pimlico.utils.core) stages (pimlico.core.modules.multistage.MultistageModuleInfo attribute) StanfordDependencyParseCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.dependency) StanfordDependencyParseCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.parse) (class in pimlico.datatypes.parse.dependency) start() (pimlico.core.external.java.Py4JInterface method) start_java_process() (in module pimlico.core.external.java) start_worker() (pimlico.core.modules.map.multiproc.MultiprocessingMapPool method) (pimlico.core.modules.map.threaded.ThreadingMapPool method) status (pimlico.core.modules.base.BaseModuleInfo attribute) (pimlico.core.modules.multistage.MultistageModuleInfo attribute) status_cmd() (in module pimlico.cli.status) status_colored() (in module pimlico.cli.status) stop() (pimlico.core.external.java.Py4JInterface method) StopProcessing str_to_bool() (in module pimlico.core.modules.options) StreamCommunicationError StreamCommunicationPacket (class in pimlico.utils.communicate) strip_punctuation() (in module pimlico.utils.linguistic) subordinate_additional_name() (pimlico.datatypes.base.PimlicoDatatypeWriter method) (pimlico.datatypes.PimlicoDatatypeWriter method) subsample() (in module pimlico.utils.probability) supplied_additional (pimlico.datatypes.base.PimlicoDatatype attribute) (pimlico.datatypes.PimlicoDatatype attribute) (pimlico.datatypes.plotting.PlotOutput attribute) SystemCommandDependency (class in pimlico.core.dependencies.base)

T

table_div() (in module pimlico.utils.docs.rest) TarredCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.tar) TarredCorpusIterationError, [1] TarredCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.tar) task_complete() (pimlico.datatypes.base.PimlicoDatatypeWriter method) (pimlico.datatypes.PimlicoDatatypeWriter method) tear_down() (pimlico.core.modules.map.DocumentMapProcessMixin method) term_dictionary (pimlico.datatypes.features.IndexedTermFeatureListCorpus attribute) (pimlico.datatypes.IndexedTermFeatureListCorpus attribute) TermFeatureListCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.features) TermFeatureListCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.features) THREAD_TYPE (pimlico.core.modules.map.threaded.ThreadingMapPool attribute) threading_executor_factory() (in module pimlico.core.modules.map.threaded) ThreadingMapModuleExecutor (class in pimlico.core.modules.map.threaded) ThreadingMapPool (class in pimlico.core.modules.map.threaded)

ThreadingMapThread (class in pimlico.core.modules.map.threaded) timeout() (in module pimlico.utils.timeout) timeout_process() (in module pimlico.utils.communicate) title_box() (in module pimlico.utils.format) to_json_dict() (pimlico.datatypes.coref.corenlp.Mention method) (pimlico.datatypes.coref.opennlp.Entity method) (pimlico.datatypes.coref.opennlp.Mention method) TokenizedCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.tokenized) TokenizedCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.tokenized) TreeStringsDocumentType (class in pimlico.datatypes) (class in pimlico.datatypes.parse) trim_docstring() (in module pimlico.utils.docs) truncate() (in module pimlico.utils.strings) type_checking_name() (pimlico.datatypes.base.DynamicInputDatatypeRequirement method) (pimlico.datatypes.DynamicInputDatatypeRequirement method) (pimlico.datatypes.IterableCorpus class method) (pimlico.datatypes.PimlicoDatatype class method) (pimlico.datatypes.base.IterableCorpus class method) (pimlico.datatypes.base.PimlicoDatatype class method) typecheck_inputs() (pimlico.core.modules.base.BaseModuleInfo method) (pimlico.core.modules.multistage.MultistageModuleInfo method) TypeCheckError

U

unlock() (pimlico.core.modules.base.BaseModuleInfo method) unlock_cmd() (in module pimlico.cli.run) unpacker (pimlico.datatypes.ints.IntegerListsDocumentType attribute) (pimlico.datatypes.table.IntegerTableDocumentType attribute)

update() (pimlico.utils.progress.SafeProgressBar method) update_processing_status() (pimlico.core.modules.map.DocumentMapModuleExecutor method)

V

var_substitute() (in module pimlico.core.config)

W

Word2VecModel (class in pimlico.datatypes.word2vec) Word2VecModelWriter (class in pimlico.datatypes.word2vec) word_boundary (pimlico.datatypes.word_annotations.WordAnnotationsDocumentType attribute) (pimlico.datatypes.WordAnnotationsDocumentType attribute) word_re (pimlico.datatypes.word_annotations.WordAnnotationsDocumentType attribute) (pimlico.datatypes.WordAnnotationsDocumentType attribute) WordAnnotationCorpus (class in pimlico.datatypes) (class in pimlico.datatypes.word_annotations) WordAnnotationCorpusWithRequiredFields (class in pimlico.datatypes) (class in pimlico.datatypes.word_annotations) WordAnnotationCorpusWriter (class in pimlico.datatypes) (class in pimlico.datatypes.word_annotations) WordAnnotationsDocumentType (class in pimlico.datatypes) (class in pimlico.datatypes.word_annotations) WorkerShutdownError

WorkerStartupError wrap_module_info_as_filter() (in module pimlico.core.modules.map.filter) wrapped_module_info (pimlico.core.modules.map.filter.DocumentMapOutputTypeWrapper attribute) write_architecture() (pimlico.datatypes.keras.KerasModelWriter method) write_dictionaries() (pimlico.datatypes.features.IndexedTermFeatureListCorpusWriter method) (pimlico.datatypes.IndexedTermFeatureListCorpusWriter method) write_metadata() (pimlico.datatypes.base.PimlicoDatatypeWriter method) (pimlico.datatypes.PimlicoDatatypeWriter method) write_model() (pimlico.datatypes.keras.KerasModelWriter method) write_weights() (pimlico.datatypes.keras.KerasModelWriter method)

X

XmlDocumentIterator (class in pimlico.datatypes) (class in pimlico.datatypes.xml)